Library QC from ONT reads

Upload FASTQ files and set up each library.

01

Your ONT files

0 files

↑Drop FASTQ files hereor browse filesFASTQ / FASTQ.gz · loading upload limits…

Run larger files locally. Download pipeline from GitHub ↗

Each file runs as a separate analysis, with its own settings and private report.

02

Contact & delivery

Email address (optional)

Receive one summary when all files finish, or leave blank and use your private task links.

Submission code

Use the code provided by the service operator.

Website

I have permission to upload and process these sequencing files. I understand the data retention policy below. I confirm that these files contain no human patient data (including de-identified patient data) or other sensitive personal data.

Select a file to begin

Inside your report

01
Library structure
Adapter completeness, insert sizes and i5/i7 pairs.
02
Assay-specific QC
Chromatin coverage or Micro-C contacts, ligation and MNase profiles.
03
Portable results
Interactive reports, figures and data tables in one download.

Example reports

Access & retention

Reports require your private task link. Uploaded reads and calculation files are removed after processing. Reports are kept for 7 days, then deleted automatically.

Save your private task links before leaving.

Analysis

Save your private link to return to this analysis.

Anyone with a private link can access that task. Share it only with people you trust.

ONT-LibQC

Email Citation MIT License

Developed by Hongjiang Liu · Jongmin Kim LabKim Lab